Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 MIR6727-201ENST00000620702 65 ntBASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNRF3Q9ULT6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 MIR4722-201ENST00000578292 60 ntBASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 AC090340.1-201ENST00000620778 4980 ntBASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
ZNRF3Q9ULT6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 MPRIPP1-201ENST00000452433 1089 ntBASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNRF3Q9ULT6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms