Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 MIR4453-201ENST00000584019 89 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 AC015911.4-201ENST00000588022 1070 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HACD3Q9P035 GPALPP1-207ENST00000611650 899 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.12■□□□□ 0.17
HACD3Q9P035 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.12■□□□□ 0.17
HACD3Q9P035 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.12■□□□□ 0.17
HACD3Q9P035 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HACD3Q9P035 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 AC134407.2-201ENST00000625089 1978 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 AL139400.1-201ENST00000366220 510 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HACD3Q9P035 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 EEF1DP4-201ENST00000446006 880 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.11■□□□□ 0.17
HACD3Q9P035 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.11■□□□□ 0.17
HACD3Q9P035 AC109322.1-201ENST00000524499 1264 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 BANF1P1-201ENST00000553684 263 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 RN7SL828P-201ENST00000607615 303 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 BNIP3P1-202ENST00000550043 1585 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
HACD3Q9P035 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.11■□□□□ 0.17
HACD3Q9P035 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HACD3Q9P035 AL365209.1-201ENST00000624418 6473 ntBASIC16.11■□□□□ 0.17
HACD3Q9P035 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HACD3Q9P035 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
HACD3Q9P035 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HACD3Q9P035 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HACD3Q9P035 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.1■□□□□ 0.17
HACD3Q9P035 AC067863.1-201ENST00000494933 530 ntBASIC16.1■□□□□ 0.17
HACD3Q9P035 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HACD3Q9P035 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.1■□□□□ 0.17
HACD3Q9P035 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.1■□□□□ 0.17
HACD3Q9P035 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
HACD3Q9P035 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HACD3Q9P035 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms