Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIN7CQ9NUP9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AC092865.5-201ENST00000545435 363 ntBASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AL109954.1-202ENST00000564051 2148 ntBASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AP002472.1-201ENST00000577490 586 ntBASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AC006486.2-201ENST00000624246 2199 ntBASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 AP002414.2-201ENST00000591780 3365 ntBASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.26□□□□□ -0.29
LIN7CQ9NUP9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 KRT18P13-201ENST00000400056 1290 ntBASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 FAM58CP-201ENST00000435741 640 ntBASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC091812.2-201ENST00000619081 385 ntBASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LIN7CQ9NUP9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms