Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AC074338.1-201ENST00000416825 156 ntBASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AC119751.2-201ENST00000504529 210 ntBASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AC104596.2-201ENST00000512793 793 ntBASIC16.43■□□□□ 0.22
HPS4Q9NQG7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 KRT8P37-201ENST00000451609 1420 ntBASIC16.43■□□□□ 0.22
HPS4Q9NQG7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HPS4Q9NQG7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PCDHA1-201ENST00000378133 2726 ntBASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 RPL13P2-201ENST00000440687 659 ntBASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AC245100.5-201ENST00000452108 331 ntBASIC16.42■□□□□ 0.22
HPS4Q9NQG7 RN7SL399P-201ENST00000471648 279 ntBASIC16.42■□□□□ 0.22
HPS4Q9NQG7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AL158212.4-201ENST00000624062 1286 ntBASIC16.42■□□□□ 0.22
HPS4Q9NQG7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.42■□□□□ 0.22
HPS4Q9NQG7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 AC243562.2-201ENST00000561247 970 ntBASIC16.41■□□□□ 0.22
HPS4Q9NQG7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms