Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 AC010336.2-201ENST00000564226 506 ntBASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 AL158211.3-201ENST00000607385 239 ntBASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSER1Q9C0I3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.71■□□□□ 0.42
CCSER1Q9C0I3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC006486.2-201ENST00000624246 2199 ntBASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 RFPL4AP1-201ENST00000530883 850 ntBASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 HYMAI-201ENST00000635591 3347 ntBASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSER1Q9C0I3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
CCSER1Q9C0I3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms