Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXP3Q9BZS1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 AC112693.3-201ENST00000624819 1983 ntBASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 AC073439.1-201ENST00000624121 1774 ntBASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXP3Q9BZS1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 AC109322.1-201ENST00000524499 1264 ntBASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXP3Q9BZS1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 AC068418.2-201ENST00000577309 3703 ntBASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms