Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 AC138028.6-201ENST00000616106 1482 ntBASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 CNN2P10-201ENST00000443067 918 ntBASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 RNA5SP423-201ENST00000517127 109 ntBASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 AL096828.3-201ENST00000615354 462 ntBASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 AL354989.2-201ENST00000435838 1540 ntBASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH11XQ9BZA7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC114812.1-204ENST00000449669 728 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AKR7A2P1-201ENST00000460134 915 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 ACTG1P17-201ENST00000558391 1119 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC104982.3-201ENST00000581995 514 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AL021578.1-201ENST00000613646 709 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC148477.4-201ENST00000613430 1793 ntBASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH11XQ9BZA7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 AC106872.11-201ENST00000605838 421 ntBASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 AC025181.2-201ENST00000606994 802 ntBASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 AC080080.1-201ENST00000625121 2420 ntBASIC20.27■□□□□ 0.84
PCDH11XQ9BZA7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms