Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SSR4P1-203ENST00000599569 2260 ntBASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 FRMD8P1-201ENST00000440433 1524 ntBASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 AC063926.3-201ENST00000624734 5658 ntBASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAF4Q9BUZ4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 SPDYE7P-202ENST00000420373 878 ntBASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 SPDYE14P-201ENST00000442619 822 ntBASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF4Q9BUZ4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC107890.1-201ENST00000422478 521 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC055876.3-201ENST00000431496 288 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC125807.1-201ENST00000483097 614 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 SLC25A39P2-201ENST00000537614 270 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC027307.2-201ENST00000591252 911 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC138649.4-201ENST00000612222 287 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AJ011932.1-201ENST00000621707 465 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms