Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 FER1L4-210ENST00000615531 5998 ntBASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BPIFA3Q9BQP9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 KRT18P56-201ENST00000507275 550 ntBASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BPIFA3Q9BQP9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 FAAHP1-202ENST00000446499 1238 ntBASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 KRT18P2-201ENST00000447938 1258 ntBASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 RNA5SP410-201ENST00000516285 106 ntBASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 AC027307.2-201ENST00000591252 911 ntBASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BPIFA3Q9BQP9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BPIFA3Q9BQP9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BPIFA3Q9BQP9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BPIFA3Q9BQP9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.51■□□□□ 0.39
BPIFA3Q9BQP9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BPIFA3Q9BQP9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms