Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCL13Q99616 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL13Q99616 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 BASP1P1-201ENST00000430708 665 ntBASIC13.31□□□□□ -0.28
CCL13Q99616 HIST3H2BA-201ENST00000436555 524 ntBASIC13.31□□□□□ -0.28
CCL13Q99616 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 EEF1DP4-201ENST00000446006 880 ntBASIC13.31□□□□□ -0.28
CCL13Q99616 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL13Q99616 RN7SL618P-201ENST00000477850 296 ntBASIC13.31□□□□□ -0.28
CCL13Q99616 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL13Q99616 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL13Q99616 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 AC132872.4-202ENST00000622924 2756 ntBASIC13.3□□□□□ -0.28
CCL13Q99616 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 MIR770-201ENST00000390219 98 ntBASIC13.3□□□□□ -0.28
CCL13Q99616 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL13Q99616 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL13Q99616 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 AL512361.1-201ENST00000554200 418 ntBASIC13.3□□□□□ -0.28
CCL13Q99616 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL13Q99616 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL13Q99616 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL13Q99616 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 AC087499.5-201ENST00000452760 1342 ntBASIC13.3□□□□□ -0.28
CCL13Q99616 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCL13Q99616 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL13Q99616 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL13Q99616 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCL13Q99616 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CCL13Q99616 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL13Q99616 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL13Q99616 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms