Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 RARRES2P5-201ENST00000564013 466 ntBASIC21.15■□□□□ 0.98
CFAP53Q96M91 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CFAP53Q96M91 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.15■□□□□ 0.98
CFAP53Q96M91 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.14■□□□□ 0.98
CFAP53Q96M91 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 AC138969.3-201ENST00000546612 1459 ntBASIC21.14■□□□□ 0.98
CFAP53Q96M91 AC138932.2-201ENST00000548268 1459 ntBASIC21.14■□□□□ 0.98
CFAP53Q96M91 AC126755.4-201ENST00000549796 1459 ntBASIC21.14■□□□□ 0.98
CFAP53Q96M91 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 AP003680.1-201ENST00000598970 3660 ntBASIC21.14■□□□□ 0.98
CFAP53Q96M91 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CFAP53Q96M91 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 AL035633.1-201ENST00000406139 838 ntBASIC21.14■□□□□ 0.97
CFAP53Q96M91 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 API5-211ENST00000534695 560 ntTSL 5 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 RRP7BP-205ENST00000566851 833 ntBASIC21.14■□□□□ 0.97
CFAP53Q96M91 SPDYE22P-201ENST00000582158 798 ntBASIC21.14■□□□□ 0.97
CFAP53Q96M91 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 AC099568.2-201ENST00000609194 695 ntBASIC21.14■□□□□ 0.97
CFAP53Q96M91 AL158212.4-201ENST00000624062 1286 ntBASIC21.14■□□□□ 0.97
CFAP53Q96M91 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC21.14■□□□□ 0.97
CFAP53Q96M91 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CFAP53Q96M91 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.13■□□□□ 0.97
CFAP53Q96M91 AL662799.1-202ENST00000614205 422 ntBASIC21.13■□□□□ 0.97
CFAP53Q96M91 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 AP005117.1-202ENST00000581724 1908 ntBASIC21.13■□□□□ 0.97
CFAP53Q96M91 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.13■□□□□ 0.97
CFAP53Q96M91 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.13■□□□□ 0.97
CFAP53Q96M91 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFAP53Q96M91 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms