Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 MIR4469-201ENST00000583919 79 ntBASIC16.81■□□□□ 0.28
TRIM11Q96F44 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM11Q96F44 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM11Q96F44 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 AC127383.1-201ENST00000444697 1800 ntBASIC16.8■□□□□ 0.28
TRIM11Q96F44 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 HNRNPUP1-201ENST00000554987 333 ntBASIC16.8■□□□□ 0.28
TRIM11Q96F44 AL109954.1-202ENST00000564051 2148 ntBASIC16.8■□□□□ 0.28
TRIM11Q96F44 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 AC004835.2-201ENST00000603762 682 ntBASIC16.8■□□□□ 0.28
TRIM11Q96F44 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM11Q96F44 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM11Q96F44 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 AC004461.1-201ENST00000412461 403 ntBASIC16.79■□□□□ 0.28
TRIM11Q96F44 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 AC105021.1-202ENST00000570572 669 ntBASIC16.79■□□□□ 0.28
TRIM11Q96F44 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRIM11Q96F44 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM11Q96F44 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms