Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 AL133338.1-201ENST00000565695 1517 ntBASIC19.39■□□□□ 0.69
RTL9Q8NET4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 GNRHR2-203ENST00000581100 1187 ntBASIC19.39■□□□□ 0.69
RTL9Q8NET4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 ACKR1-201ENST00000368121 1240 ntBASIC19.38■□□□□ 0.69
RTL9Q8NET4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 KLF2P4-201ENST00000451959 1225 ntBASIC19.38■□□□□ 0.69
RTL9Q8NET4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL9Q8NET4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 MSTO2P-201ENST00000314835 1709 ntBASIC19.38■□□□□ 0.69
RTL9Q8NET4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL9Q8NET4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 RPL7P3-201ENST00000441388 714 ntBASIC19.37■□□□□ 0.69
RTL9Q8NET4 AC093433.1-201ENST00000458048 571 ntBASIC19.37■□□□□ 0.69
RTL9Q8NET4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 AC084346.2-201ENST00000607097 949 ntBASIC19.37■□□□□ 0.69
RTL9Q8NET4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL9Q8NET4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL9Q8NET4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL9Q8NET4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RTL9Q8NET4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms