Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 YBX1P6-201ENST00000442962 1002 ntBASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 KRT90P-201ENST00000549264 1064 ntBASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS3Q8IXF0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS3Q8IXF0 PCDHA14-201ENST00000506751 2298 ntBASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AC026954.1-201ENST00000429771 1293 ntBASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AC245100.3-201ENST00000441281 285 ntBASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS3Q8IXF0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC026410.3-201ENST00000514280 936 ntBASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC079316.1-201ENST00000548397 411 ntBASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 GNRHR2-203ENST00000581100 1187 ntBASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC010328.2-201ENST00000597698 1111 ntBASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC009542.2-202ENST00000619004 1067 ntBASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS3Q8IXF0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms