Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 RPL13AP23-201ENST00000480739 586 ntBASIC19.82■□□□□ 0.76
SKAP1Q86WV1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 PDPK2P-202ENST00000562415 1191 ntBASIC19.82■□□□□ 0.76
SKAP1Q86WV1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKAP1Q86WV1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AC005840.4-201ENST00000541242 2494 ntBASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AC074386.1-202ENST00000463561 864 ntBASIC19.81■□□□□ 0.76
SKAP1Q86WV1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SKAP1Q86WV1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 FAM45BP-202ENST00000592932 1624 ntBASIC19.8■□□□□ 0.76
SKAP1Q86WV1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AC142381.1-201ENST00000426099 345 ntBASIC19.8■□□□□ 0.76
SKAP1Q86WV1 FAAHP1-202ENST00000446499 1238 ntBASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AC073389.1-201ENST00000595595 795 ntBASIC19.8■□□□□ 0.76
SKAP1Q86WV1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SKAP1Q86WV1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SKAP1Q86WV1 CICP11-201ENST00000434745 2827 ntBASIC19.79■□□□□ 0.76
SKAP1Q86WV1 AC104581.4-201ENST00000623126 3052 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms