Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 HNRNPDP1-201ENST00000439535 754 ntBASIC16.47■□□□□ 0.23
CCDC25Q86WR0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 AC112693.3-201ENST00000624819 1983 ntBASIC16.47■□□□□ 0.23
CCDC25Q86WR0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC25Q86WR0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 FAM45BP-202ENST00000592932 1624 ntBASIC16.46■□□□□ 0.23
CCDC25Q86WR0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 IFNL4P1-201ENST00000607083 540 ntBASIC16.46■□□□□ 0.23
CCDC25Q86WR0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC25Q86WR0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC25Q86WR0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC25Q86WR0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms