Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 ACKR1-201ENST00000368121 1240 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS13CQ709C8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS13CQ709C8 LTB4R2-202ENST00000528054 3092 ntBASIC12.95□□□□□ -0.34
VPS13CQ709C8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 MIR769-201ENST00000390225 118 ntBASIC12.94□□□□□ -0.34
VPS13CQ709C8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 BNIP3P13-201ENST00000599968 566 ntBASIC12.94□□□□□ -0.34
VPS13CQ709C8 AP005019.2-201ENST00000615104 511 ntBASIC12.94□□□□□ -0.34
VPS13CQ709C8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 CEP164P1-201ENST00000455142 418 ntBASIC12.94□□□□□ -0.34
VPS13CQ709C8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS13CQ709C8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VPS13CQ709C8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 RPL13AP19-201ENST00000434320 584 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 MIR6756-201ENST00000616240 63 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 TUBBP5-203ENST00000508529 1334 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 RNU1-114P-201ENST00000365297 166 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 RN7SL774P-201ENST00000577467 290 ntBASIC12.93□□□□□ -0.34
VPS13CQ709C8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13CQ709C8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
VPS13CQ709C8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms