Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AC120045.2-201ENST00000567334 178 ntBASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AC009486.1-201ENST00000569860 813 ntBASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AC244093.1-201ENST00000610837 814 ntBASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC149Q6ZUS6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC006449.6-201ENST00000612330 2296 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 MIR648-201ENST00000385046 94 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 PFN1P12-201ENST00000455938 534 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 KRT18P43-201ENST00000469825 1281 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC099548.2-209ENST00000480264 625 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AP001889.1-201ENST00000525414 633 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 AC084018.2-201ENST00000613093 2607 ntBASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC149Q6ZUS6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 YBX1P6-201ENST00000442962 1002 ntBASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 VDAC1P7-201ENST00000462417 847 ntBASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC149Q6ZUS6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms