Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC39BQ5VTQ0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AC022532.1-201ENST00000624563 1728 ntBASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AC063926.3-201ENST00000624734 5658 ntBASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AL691432.1-201ENST00000596308 1422 ntBASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 BCRP1-201ENST00000444246 691 ntBASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.56■□□□□ 0.24
TTC39BQ5VTQ0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 FO393414.2-201ENST00000405153 598 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 TSSK5P-201ENST00000423978 907 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 EEF1DP4-201ENST00000446006 880 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 ZNF890P-202ENST00000530367 1156 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 AL136982.4-201ENST00000437689 1740 ntBASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TTC39BQ5VTQ0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms