Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 KRT8P4-201ENST00000509735 1454 ntBASIC13.53□□□□□ -0.24
LRRK2Q5S007 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.53□□□□□ -0.24
LRRK2Q5S007 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LRRK2Q5S007 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 RNU1-114P-201ENST00000365297 166 ntBASIC13.52□□□□□ -0.24
LRRK2Q5S007 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 AL133267.1-201ENST00000398220 340 ntBASIC13.52□□□□□ -0.24
LRRK2Q5S007 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 AC116345.2-201ENST00000512837 523 ntBASIC13.52□□□□□ -0.24
LRRK2Q5S007 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 AC051619.9-201ENST00000623237 597 ntBASIC13.52□□□□□ -0.24
LRRK2Q5S007 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.52□□□□□ -0.24
LRRK2Q5S007 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LRRK2Q5S007 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AC026410.1-201ENST00000507366 1101 ntBASIC13.52□□□□□ -0.25
LRRK2Q5S007 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AC006158.1-201ENST00000610661 249 ntBASIC13.52□□□□□ -0.25
LRRK2Q5S007 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AC138466.4-201ENST00000623965 852 ntBASIC13.52□□□□□ -0.25
LRRK2Q5S007 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.52□□□□□ -0.25
LRRK2Q5S007 AC018892.3-201ENST00000623986 2499 ntBASIC13.52□□□□□ -0.25
LRRK2Q5S007 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LRRK2Q5S007 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 IGHV3-37-201ENST00000518544 340 ntBASIC13.51□□□□□ -0.25
LRRK2Q5S007 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 C2orf69P1-201ENST00000563532 1093 ntBASIC13.51□□□□□ -0.25
LRRK2Q5S007 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRK2Q5S007 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRK2Q5S007 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms