Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 COX11-210ENST00000639671 696 ntBASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 AL121723.1-201ENST00000445194 1519 ntBASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 OR6D1P-203ENST00000641209 4860 ntBASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNFT1Q5M7Z0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 TDH-203ENST00000531764 1110 ntBASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AL390728.6-201ENST00000566446 1246 ntBASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AC120045.2-201ENST00000567334 178 ntBASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.23□□□□□ -0.13
RNFT1Q5M7Z0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 AC011477.6-201ENST00000604980 1927 ntBASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNFT1Q5M7Z0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms