Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AL512361.1-201ENST00000554200 418 ntBASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD3Q5JTY5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 AC092580.3-201ENST00000430932 139 ntBASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 DBET-201ENST00000630918 3363 ntBASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD3Q5JTY5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AC107890.1-201ENST00000422478 521 ntBASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AC140878.1-201ENST00000565277 250 ntBASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AC073592.8-201ENST00000624126 511 ntBASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AL033527.5-202ENST00000641632 1098 ntBASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 AC112693.3-201ENST00000624819 1983 ntBASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD3Q5JTY5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD3Q5JTY5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms