Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXF1Q12946 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXF1Q12946 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.38□□□□□ -0.11
FOXF1Q12946 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 AC005702.4-201ENST00000618393 416 ntBASIC14.38□□□□□ -0.11
FOXF1Q12946 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
FOXF1Q12946 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXF1Q12946 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXF1Q12946 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXF1Q12946 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXF1Q12946 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXF1Q12946 AL607033.1-201ENST00000623900 1599 ntBASIC14.38□□□□□ -0.11
FOXF1Q12946 CICP13-201ENST00000422015 2789 ntBASIC14.38□□□□□ -0.11
FOXF1Q12946 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
FOXF1Q12946 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXF1Q12946 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXF1Q12946 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
FOXF1Q12946 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
FOXF1Q12946 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
FOXF1Q12946 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC136604.1-201ENST00000418535 575 ntBASIC14.37□□□□□ -0.11
FOXF1Q12946 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXF1Q12946 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXF1Q12946 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXF1Q12946 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXF1Q12946 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXF1Q12946 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.37□□□□□ -0.11
FOXF1Q12946 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXF1Q12946 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FOXF1Q12946 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXF1Q12946 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXF1Q12946 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FOXF1Q12946 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FOXF1Q12946 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXF1Q12946 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXF1Q12946 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FOXF1Q12946 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXF1Q12946 MIR770-201ENST00000390219 98 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.36□□□□□ -0.11
FOXF1Q12946 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXF1Q12946 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXF1Q12946 TARDBPP1-201ENST00000442013 1203 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 AL512638.1-201ENST00000457493 794 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 AC004890.2-204ENST00000481968 304 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 AC044860.1-202ENST00000559481 777 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 AL109936.8-201ENST00000641772 604 ntBASIC14.36□□□□□ -0.11
FOXF1Q12946 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.36□□□□□ -0.11
FOXF1Q12946 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXF1Q12946 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms