Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC233724.13-201ENST00000598383 410 ntBASIC18.51■□□□□ 0.55
IRX3P78415 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
IRX3P78415 AC133539.2-201ENST00000604757 467 ntBASIC18.51■□□□□ 0.55
IRX3P78415 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 AC018665.1-201ENST00000622927 1362 ntBASIC18.51■□□□□ 0.55
IRX3P78415 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
IRX3P78415 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IRX3P78415 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX3P78415 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
IRX3P78415 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 AL442647.2-201ENST00000429864 857 ntBASIC18.5■□□□□ 0.55
IRX3P78415 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.5■□□□□ 0.55
IRX3P78415 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
IRX3P78415 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 CU634019.7-201ENST00000624153 1185 ntBASIC18.5■□□□□ 0.55
IRX3P78415 FP236241.2-201ENST00000624906 1185 ntBASIC18.5■□□□□ 0.55
IRX3P78415 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX3P78415 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IRX3P78415 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX3P78415 KRT8P37-201ENST00000451609 1420 ntBASIC18.49■□□□□ 0.55
IRX3P78415 REXO1L6P-201ENST00000603433 1515 ntBASIC18.49■□□□□ 0.55
IRX3P78415 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 ANKRD19P-201ENST00000338192 862 ntBASIC18.49■□□□□ 0.55
IRX3P78415 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 POU5F1P6-201ENST00000466990 990 ntBASIC18.49■□□□□ 0.55
IRX3P78415 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX3P78415 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX3P78415 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.49■□□□□ 0.55
IRX3P78415 AL391069.4-201ENST00000609583 481 ntBASIC18.49■□□□□ 0.55
IRX3P78415 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX3P78415 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX3P78415 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX3P78415 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
IRX3P78415 AC105020.1-201ENST00000435356 2205 ntBASIC18.49■□□□□ 0.55
IRX3P78415 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX3P78415 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.48■□□□□ 0.55
IRX3P78415 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX3P78415 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX3P78415 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms