Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNTNAP1P78357 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CNTNAP1P78357 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 AC011676.5-201ENST00000624864 2660 ntBASIC18.64■□□□□ 0.57
CNTNAP1P78357 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.64■□□□□ 0.57
CNTNAP1P78357 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 CASP16P-204ENST00000635032 809 ntBASIC18.64■□□□□ 0.57
CNTNAP1P78357 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.64■□□□□ 0.57
CNTNAP1P78357 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNTNAP1P78357 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNTNAP1P78357 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNTNAP1P78357 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 ACKR1-201ENST00000368121 1240 ntBASIC18.62■□□□□ 0.57
CNTNAP1P78357 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNTNAP1P78357 RN7SL574P-201ENST00000581512 297 ntBASIC18.62■□□□□ 0.57
CNTNAP1P78357 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CNTNAP1P78357 AC006449.6-201ENST00000612330 2296 ntBASIC18.61■□□□□ 0.57
CNTNAP1P78357 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP1P78357 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.61■□□□□ 0.57
CNTNAP1P78357 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNTNAP1P78357 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP1P78357 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP1P78357 MIR1202-201ENST00000408529 83 ntBASIC18.61■□□□□ 0.57
CNTNAP1P78357 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.61■□□□□ 0.57
CNTNAP1P78357 HSPB1P2-201ENST00000448722 546 ntBASIC18.61■□□□□ 0.57
CNTNAP1P78357 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNTNAP1P78357 GAPDHP40-201ENST00000505218 1006 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms