Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ASIC1P78348 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ASIC1P78348 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.75■□□□□ 0.43
ASIC1P78348 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ASIC1P78348 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ASIC1P78348 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ASIC1P78348 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 SSR4P1-203ENST00000599569 2260 ntBASIC17.74■□□□□ 0.43
ASIC1P78348 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 PPT1-215ENST00000641471 2368 ntBASIC17.74■□□□□ 0.43
ASIC1P78348 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
ASIC1P78348 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.74■□□□□ 0.43
ASIC1P78348 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.74■□□□□ 0.43
ASIC1P78348 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.74■□□□□ 0.43
ASIC1P78348 PHKG1P2-201ENST00000457537 863 ntBASIC17.74■□□□□ 0.43
ASIC1P78348 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 MIR4453-201ENST00000584019 89 ntBASIC17.74■□□□□ 0.43
ASIC1P78348 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.74■□□□□ 0.43
ASIC1P78348 AC007967.4-201ENST00000614700 386 ntBASIC17.74■□□□□ 0.43
ASIC1P78348 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.74■□□□□ 0.43
ASIC1P78348 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ASIC1P78348 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ASIC1P78348 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ASIC1P78348 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.73■□□□□ 0.43
ASIC1P78348 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 MIR1233-2-201ENST00000408138 82 ntBASIC17.73■□□□□ 0.43
ASIC1P78348 MIR1233-1-201ENST00000408722 82 ntBASIC17.73■□□□□ 0.43
ASIC1P78348 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.73■□□□□ 0.43
ASIC1P78348 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ASIC1P78348 MTND6P24-201ENST00000440466 518 ntBASIC17.73■□□□□ 0.43
ASIC1P78348 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.73■□□□□ 0.43
ASIC1P78348 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.73■□□□□ 0.43
ASIC1P78348 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.73■□□□□ 0.43
ASIC1P78348 AP001059.3-201ENST00000619053 235 ntBASIC17.73■□□□□ 0.43
ASIC1P78348 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.73■□□□□ 0.43
ASIC1P78348 AC126177.1-201ENST00000547829 2218 ntBASIC17.73■□□□□ 0.43
ASIC1P78348 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.73■□□□□ 0.43
ASIC1P78348 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.73■□□□□ 0.43
ASIC1P78348 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.73■□□□□ 0.43
ASIC1P78348 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ASIC1P78348 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ASIC1P78348 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.72■□□□□ 0.43
ASIC1P78348 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms