Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBA52P62987 AC092902.6-201ENST00000641783 218 ntBASIC13.81□□□□□ -0.2
UBA52P62987 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 AC006449.6-201ENST00000612330 2296 ntBASIC13.81□□□□□ -0.2
UBA52P62987 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBA52P62987 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBA52P62987 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 GGT4P-201ENST00000623672 1708 ntBASIC13.81□□□□□ -0.2
UBA52P62987 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.81□□□□□ -0.2
UBA52P62987 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.81□□□□□ -0.2
UBA52P62987 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBA52P62987 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.8□□□□□ -0.2
UBA52P62987 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.8□□□□□ -0.2
UBA52P62987 LINC01101-201ENST00000622953 1884 ntBASIC13.8□□□□□ -0.2
UBA52P62987 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.8□□□□□ -0.2
UBA52P62987 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.8□□□□□ -0.2
UBA52P62987 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.8□□□□□ -0.2
UBA52P62987 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.8□□□□□ -0.2
UBA52P62987 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.8□□□□□ -0.2
UBA52P62987 REXO1L3P-201ENST00000622202 1288 ntBASIC13.8□□□□□ -0.2
UBA52P62987 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.8□□□□□ -0.2
UBA52P62987 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UBA52P62987 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.8□□□□□ -0.2
UBA52P62987 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBA52P62987 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBA52P62987 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 AC004461.1-201ENST00000412461 403 ntBASIC13.79□□□□□ -0.2
UBA52P62987 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.79□□□□□ -0.2
UBA52P62987 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.79□□□□□ -0.2
UBA52P62987 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
UBA52P62987 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 AC025678.2-201ENST00000562061 970 ntBASIC13.79□□□□□ -0.2
UBA52P62987 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.79□□□□□ -0.2
UBA52P62987 AC093512.1-201ENST00000617969 520 ntBASIC13.79□□□□□ -0.2
UBA52P62987 AC105339.1-204ENST00000636249 355 ntBASIC13.79□□□□□ -0.2
UBA52P62987 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms