Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC239800.4-201ENST00000603712 296 ntBASIC16.72■□□□□ 0.27
USP46P62068 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
USP46P62068 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.72■□□□□ 0.27
USP46P62068 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP46P62068 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
USP46P62068 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.71■□□□□ 0.27
USP46P62068 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
USP46P62068 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 DGCR5-201ENST00000399539 862 ntBASIC16.71■□□□□ 0.27
USP46P62068 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.71■□□□□ 0.27
USP46P62068 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.71■□□□□ 0.27
USP46P62068 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.71■□□□□ 0.27
USP46P62068 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.71■□□□□ 0.27
USP46P62068 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
USP46P62068 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.71■□□□□ 0.27
USP46P62068 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
USP46P62068 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 AC027307.3-201ENST00000594262 1100 ntBASIC16.71■□□□□ 0.27
USP46P62068 AC008494.3-201ENST00000606615 944 ntBASIC16.71■□□□□ 0.27
USP46P62068 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.71■□□□□ 0.27
USP46P62068 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.71■□□□□ 0.27
USP46P62068 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 MTHFR-217ENST00000641820 1569 ntBASIC16.71■□□□□ 0.27
USP46P62068 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.71■□□□□ 0.27
USP46P62068 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP46P62068 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
USP46P62068 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
USP46P62068 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.71■□□□□ 0.26
USP46P62068 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.7■□□□□ 0.26
USP46P62068 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
USP46P62068 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.7■□□□□ 0.26
USP46P62068 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.7■□□□□ 0.26
USP46P62068 MIR648-201ENST00000385046 94 ntBASIC16.7■□□□□ 0.26
USP46P62068 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 RPL13P2-201ENST00000440687 659 ntBASIC16.7■□□□□ 0.26
USP46P62068 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.7■□□□□ 0.26
USP46P62068 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP46P62068 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.7■□□□□ 0.26
USP46P62068 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.7■□□□□ 0.26
USP46P62068 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.7■□□□□ 0.26
USP46P62068 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms