Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT3AP56704 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
WNT3AP56704 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
WNT3AP56704 SERBP1P3-201ENST00000459980 809 ntBASIC16.03■□□□□ 0.16
WNT3AP56704 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3AP56704 AC069120.2-201ENST00000524091 540 ntBASIC16.03■□□□□ 0.16
WNT3AP56704 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3AP56704 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
WNT3AP56704 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3AP56704 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3AP56704 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
WNT3AP56704 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.03■□□□□ 0.16
WNT3AP56704 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3AP56704 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3AP56704 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3AP56704 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
WNT3AP56704 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3AP56704 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
WNT3AP56704 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT3AP56704 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3AP56704 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3AP56704 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
WNT3AP56704 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT3AP56704 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.02■□□□□ 0.16
WNT3AP56704 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.02■□□□□ 0.16
WNT3AP56704 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3AP56704 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3AP56704 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT3AP56704 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3AP56704 TEX28P1-201ENST00000613479 1221 ntBASIC16.02■□□□□ 0.16
WNT3AP56704 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT3AP56704 TEX28P2-201ENST00000617764 1221 ntBASIC16.02■□□□□ 0.16
WNT3AP56704 MIR6069-201ENST00000620069 79 ntBASIC16.02■□□□□ 0.16
WNT3AP56704 AL033527.5-202ENST00000641632 1098 ntBASIC16.02■□□□□ 0.16
WNT3AP56704 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3AP56704 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
WNT3AP56704 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3AP56704 AC136621.1-201ENST00000624017 2304 ntBASIC16.02■□□□□ 0.15
WNT3AP56704 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
WNT3AP56704 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT3AP56704 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3AP56704 SSR4P1-203ENST00000599569 2260 ntBASIC16.02■□□□□ 0.15
WNT3AP56704 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3AP56704 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3AP56704 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT3AP56704 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
WNT3AP56704 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
WNT3AP56704 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.01■□□□□ 0.15
WNT3AP56704 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
WNT3AP56704 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
WNT3AP56704 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3AP56704 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 AC009090.5-201ENST00000624886 2285 ntBASIC16.01■□□□□ 0.15
WNT3AP56704 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
WNT3AP56704 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3AP56704 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
WNT3AP56704 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms