Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC4P55056 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.63□□□□□ -0.55
APOC4P55056 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.63□□□□□ -0.55
APOC4P55056 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 CR383656.12-201ENST00000549567 513 ntBASIC11.63□□□□□ -0.55
APOC4P55056 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.63□□□□□ -0.55
APOC4P55056 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC4P55056 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
APOC4P55056 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
APOC4P55056 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC4P55056 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC4P55056 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 AC011477.6-201ENST00000604980 1927 ntBASIC11.62□□□□□ -0.55
APOC4P55056 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
APOC4P55056 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 AC009053.2-201ENST00000563701 2365 ntBASIC11.62□□□□□ -0.55
APOC4P55056 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 AC138969.2-201ENST00000532739 9932 ntBASIC11.62□□□□□ -0.55
APOC4P55056 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
APOC4P55056 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.62□□□□□ -0.55
APOC4P55056 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.62□□□□□ -0.55
APOC4P55056 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.62□□□□□ -0.55
APOC4P55056 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.62□□□□□ -0.55
APOC4P55056 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 SLED1-202ENST00000512051 380 ntBASIC11.62□□□□□ -0.55
APOC4P55056 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 API5-211ENST00000534695 560 ntTSL 5 BASIC11.62□□□□□ -0.55
APOC4P55056 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 AL596325.1-201ENST00000563991 1082 ntBASIC11.62□□□□□ -0.55
APOC4P55056 RARRES2P5-201ENST00000564013 466 ntBASIC11.62□□□□□ -0.55
APOC4P55056 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.62□□□□□ -0.55
APOC4P55056 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC4P55056 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
APOC4P55056 AC138969.3-201ENST00000546612 1459 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms