Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.32■□□□□ 0.2
AIF1P55008 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.32■□□□□ 0.2
AIF1P55008 AL390754.1-201ENST00000619088 582 ntBASIC16.32■□□□□ 0.2
AIF1P55008 PAUPAR-201ENST00000630360 2965 ntBASIC16.32■□□□□ 0.2
AIF1P55008 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.32■□□□□ 0.2
AIF1P55008 AL109936.8-201ENST00000641772 604 ntBASIC16.32■□□□□ 0.2
AIF1P55008 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AIF1P55008 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AIF1P55008 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.32■□□□□ 0.2
AIF1P55008 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AIF1P55008 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
AIF1P55008 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
AIF1P55008 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 AC092850.2-201ENST00000623821 2697 ntBASIC16.31■□□□□ 0.2
AIF1P55008 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.31■□□□□ 0.2
AIF1P55008 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 AL133267.1-201ENST00000398220 340 ntBASIC16.31■□□□□ 0.2
AIF1P55008 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
AIF1P55008 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.31■□□□□ 0.2
AIF1P55008 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 AC044860.1-202ENST00000559481 777 ntBASIC16.31■□□□□ 0.2
AIF1P55008 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.31■□□□□ 0.2
AIF1P55008 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.31■□□□□ 0.2
AIF1P55008 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
AIF1P55008 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.31■□□□□ 0.2
AIF1P55008 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.31■□□□□ 0.2
AIF1P55008 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AIF1P55008 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 AC022144.1-201ENST00000602255 1580 ntBASIC16.3■□□□□ 0.2
AIF1P55008 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.3■□□□□ 0.2
AIF1P55008 AP003680.1-201ENST00000598970 3660 ntBASIC16.3■□□□□ 0.2
AIF1P55008 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.3■□□□□ 0.2
AIF1P55008 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
AIF1P55008 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.3■□□□□ 0.2
AIF1P55008 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 RNA5SP421-201ENST00000516864 134 ntBASIC16.3■□□□□ 0.2
AIF1P55008 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.3■□□□□ 0.2
AIF1P55008 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.3■□□□□ 0.2
AIF1P55008 AL390955.2-201ENST00000603032 514 ntBASIC16.3■□□□□ 0.2
AIF1P55008 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.3■□□□□ 0.2
AIF1P55008 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AIF1P55008 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AIF1P55008 SSR4P1-203ENST00000599569 2260 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms