Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BTBD7P1-201ENST00000447253 1453 ntBASIC16.85■□□□□ 0.29
CACNA2D1P54289 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA2D1P54289 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNA2D1P54289 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA2D1P54289 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNA2D1P54289 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CACNA2D1P54289 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 COX20P2-201ENST00000452636 358 ntBASIC16.84■□□□□ 0.29
CACNA2D1P54289 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 LINC01115-203ENST00000606068 577 ntBASIC16.84■□□□□ 0.29
CACNA2D1P54289 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 LINC02228-204ENST00000642115 2962 ntBASIC16.84■□□□□ 0.29
CACNA2D1P54289 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CACNA2D1P54289 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.84■□□□□ 0.29
CACNA2D1P54289 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CACNA2D1P54289 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA2D1P54289 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA2D1P54289 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CACNA2D1P54289 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CACNA2D1P54289 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 AC190387.1-201ENST00000551683 408 ntBASIC16.83■□□□□ 0.28
CACNA2D1P54289 AC069224.1-201ENST00000566372 1715 ntBASIC16.83■□□□□ 0.28
CACNA2D1P54289 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SRD5A3P1-201ENST00000603021 949 ntBASIC16.83■□□□□ 0.28
CACNA2D1P54289 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 AC024909.3-201ENST00000611513 2257 ntBASIC16.83■□□□□ 0.28
CACNA2D1P54289 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CACNA2D1P54289 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA2D1P54289 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CACNA2D1P54289 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA2D1P54289 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms