Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF9P41273 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.1■□□□□ 0.33
TNFSF9P41273 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.1■□□□□ 0.33
TNFSF9P41273 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF9P41273 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 AC007431.3-201ENST00000623221 587 ntBASIC17.1■□□□□ 0.33
TNFSF9P41273 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF9P41273 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF9P41273 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF9P41273 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF9P41273 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF9P41273 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TNFSF9P41273 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFSF9P41273 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TNFSF9P41273 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 RARRES2P5-201ENST00000564013 466 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 TP53TG3HP-202ENST00000569755 579 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 AC140912.1-201ENST00000577171 1054 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.09■□□□□ 0.33
TNFSF9P41273 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFSF9P41273 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.09■□□□□ 0.33
TNFSF9P41273 AC008494.3-201ENST00000606615 944 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 AC025048.6-201ENST00000634326 1161 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TNFSF9P41273 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.09■□□□□ 0.33
TNFSF9P41273 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF9P41273 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TNFSF9P41273 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF9P41273 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TNFSF9P41273 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TNFSF9P41273 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TNFSF9P41273 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.08■□□□□ 0.33
TNFSF9P41273 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF9P41273 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFSF9P41273 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFSF9P41273 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFSF9P41273 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
TNFSF9P41273 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.08■□□□□ 0.32
TNFSF9P41273 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.08■□□□□ 0.32
TNFSF9P41273 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TNFSF9P41273 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms