Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 TSPY22P-201ENST00000427496 604 ntBASIC14.15□□□□□ -0.14
CD40LGP29965 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.15□□□□□ -0.14
CD40LGP29965 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.15□□□□□ -0.14
CD40LGP29965 AL445228.2-201ENST00000605589 952 ntBASIC14.15□□□□□ -0.14
CD40LGP29965 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 IGHV3-41-201ENST00000613121 348 ntBASIC14.15□□□□□ -0.14
CD40LGP29965 AP000550.4-202ENST00000639755 178 ntBASIC14.15□□□□□ -0.14
CD40LGP29965 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD40LGP29965 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40LGP29965 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40LGP29965 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CD40LGP29965 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.14□□□□□ -0.15
CD40LGP29965 NUS1P1-201ENST00000446295 882 ntBASIC14.14□□□□□ -0.15
CD40LGP29965 KRT8P26-201ENST00000534154 1276 ntBASIC14.14□□□□□ -0.15
CD40LGP29965 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 TERC-201ENST00000602385 541 ntBASIC14.14□□□□□ -0.15
CD40LGP29965 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD40LGP29965 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD40LGP29965 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms