Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PTK7-220ENST00000497957 713 ntTSL 315.77■□□□□ 0.121e-8■■□□□ 11.6
RPS3P23396 PTK7-218ENST00000493339 2987 ntTSL 212.75□□□□□ -0.371e-8■■□□□ 11.6
RPS3P23396 HDAC2-203ENST00000518690 564 ntTSL 521.9■■□□□ 1.11e-8■■□□□ 11.6
RPS3P23396 HDAC2-214ENST00000523240 557 ntTSL 521.9■■□□□ 1.11e-8■■□□□ 11.6
RPS3P23396 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.382e-8■■□□□ 11.6
RPS3P23396 SPC24-207ENST00000592967 833 ntTSL 315.95■□□□□ 0.142e-8■■□□□ 11.6
RPS3P23396 SPC24-201ENST00000423327 840 ntTSL 214.98□□□□□ -0.012e-8■■□□□ 11.6
RPS3P23396 SPC24-203ENST00000585567 633 ntTSL 314.98□□□□□ -0.012e-8■■□□□ 11.6
RPS3P23396 U2AF2-205ENST00000588850 637 ntTSL 214.88□□□□□ -0.032e-8■■□□□ 11.6
RPS3P23396 SPC24-205ENST00000591396 832 ntTSL 514.43□□□□□ -0.12e-8■■□□□ 11.6
RPS3P23396 U2AF2-203ENST00000587196 778 ntTSL 313.58□□□□□ -0.242e-8■■□□□ 11.6
RPS3P23396 SPC24-204ENST00000586708 378 ntTSL 513.38□□□□□ -0.272e-8■■□□□ 11.6
RPS3P23396 SPC24-202ENST00000585486 699 ntTSL 213.28□□□□□ -0.282e-8■■□□□ 11.6
RPS3P23396 ELP2-214ENST00000540766 1049 ntTSL 312.93□□□□□ -0.348e-7■■□□□ 11.6
RPS3P23396 RUVBL2-210ENST00000598768 497 ntTSL 59.45□□□□□ -0.92e-8■■□□□ 11.6
RPS3P23396 RAB14-202ENST00000451303 711 ntTSL 39.15□□□□□ -0.942e-8■■□□□ 11.6
RPS3P23396 AP2B1-208ENST00000591610 559 ntTSL 47.79□□□□□ -1.162e-8■■□□□ 11.6
RPS3P23396 AP2B1-204ENST00000589774 552 ntTSL 44.6□□□□□ -1.672e-8■■□□□ 11.6
RPS3P23396 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.5□□□□□ -1.692e-8■■□□□ 11.6
RPS3P23396 AP2B1-210ENST00000593014 577 ntTSL 42.97□□□□□ -1.932e-8■■□□□ 11.6
RPS3P23396 RSL1D1-212ENST00000574823 576 ntTSL 22.36□□□□□ -2.032e-8■■□□□ 11.6
RPS3P23396 CAPRIN1-206ENST00000528948 585 ntTSL 28.78□□□□□ -12e-8■■□□□ 11.6
RPS3P23396 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.43e-18■■□□□ 11.6
RPS3P23396 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.543e-18■■□□□ 11.6
RPS3P23396 NONO-215ENST00000535149 2882 ntTSL 2 BASIC9.98□□□□□ -0.813e-18■■□□□ 11.6
RPS3P23396 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.853e-18■■□□□ 11.6
RPS3P23396 NONO-205ENST00000418921 703 ntTSL 59.16□□□□□ -0.943e-18■■□□□ 11.6
RPS3P23396 NONO-204ENST00000413858 855 ntTSL 37.76□□□□□ -1.173e-18■■□□□ 11.6
RPS3P23396 NONO-212ENST00000474431 644 ntTSL 57.51□□□□□ -1.213e-18■■□□□ 11.6
RPS3P23396 NONO-214ENST00000490044 3215 ntTSL 26.66□□□□□ -1.343e-18■■□□□ 11.6
RPS3P23396 NONO-209ENST00000471419 846 ntTSL 26.65□□□□□ -1.343e-18■■□□□ 11.6
RPS3P23396 NONO-210ENST00000472185 397 ntTSL 56.2□□□□□ -1.423e-18■■□□□ 11.6
RPS3P23396 NONO-208ENST00000454976 726 ntTSL 45.49□□□□□ -1.533e-18■■□□□ 11.6
RPS3P23396 CANX-211ENST00000506298 549 ntTSL 21.72□□□□□ -2.131e-26■■□□□ 11.5
RPS3P23396 FUCA2-202ENST00000367585 646 ntTSL 417.96■□□□□ 0.478e-7■■□□□ 11.5
RPS3P23396 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.018e-7■■□□□ 11.5
RPS3P23396 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.872e-11■■□□□ 11.5
RPS3P23396 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.93■□□□□ 0.32e-11■■□□□ 11.5
RPS3P23396 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.172e-11■■□□□ 11.5
RPS3P23396 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.9■□□□□ 0.142e-11■■□□□ 11.5
RPS3P23396 DNM2-215ENST00000590806 5651 ntTSL 214.46□□□□□ -0.12e-11■■□□□ 11.5
RPS3P23396 DNM2-221ENST00000593203 2507 ntTSL 214.01□□□□□ -0.172e-11■■□□□ 11.5
RPS3P23396 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.262e-11■■□□□ 11.5
RPS3P23396 AKR1C3-208ENST00000603484 629 ntTSL 20.52□□□□□ -2.333e-8■■□□□ 11.5
RPS3P23396 FBLN1-217ENST00000476366 872 ntTSL 512.62□□□□□ -0.391e-9■■□□□ 11.5
RPS3P23396 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.771e-6■■□□□ 11.5
RPS3P23396 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.491e-6■■□□□ 11.5
RPS3P23396 SCAMP4-207ENST00000472442 2973 ntTSL 212.83□□□□□ -0.361e-6■■□□□ 11.5
RPS3P23396 ZNF207-211ENST00000579810 979 ntTSL 57.99□□□□□ -1.132e-8■■□□□ 11.5
RPS3P23396 ZNF207-213ENST00000581531 3560 ntTSL 55.87□□□□□ -1.472e-8■■□□□ 11.5
RPS3P23396 HNRNPA2B1-203ENST00000360787 1724 ntTSL 514.86□□□□□ -0.032e-36■■□□□ 11.5
RPS3P23396 HNRNPA2B1-206ENST00000490912 5328 ntTSL 214.31□□□□□ -0.122e-36■■□□□ 11.5
RPS3P23396 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.4□□□□□ -0.262e-36■■□□□ 11.5
RPS3P23396 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.572e-36■■□□□ 11.5
RPS3P23396 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.62□□□□□ -0.712e-36■■□□□ 11.5
RPS3P23396 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.192e-36■■□□□ 11.5
RPS3P23396 POLR2E-207ENST00000590060 1052 ntTSL 519.14■□□□□ 0.653e-6■■□□□ 11.5
RPS3P23396 CTSA-219ENST00000607841 571 ntTSL 214□□□□□ -0.175e-20■■□□□ 11.5
RPS3P23396 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.528e-21■■□□□ 11.5
RPS3P23396 RPL23-207ENST00000577407 615 ntTSL 2 BASIC11.82□□□□□ -0.528e-21■■□□□ 11.5
RPS3P23396 RPL23-204ENST00000394333 444 ntTSL 2 BASIC11.28□□□□□ -0.68e-21■■□□□ 11.5
RPS3P23396 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.798e-21■■□□□ 11.5
RPS3P23396 RPL23-211ENST00000584912 2779 ntTSL 1 (best)8.9□□□□□ -0.988e-21■■□□□ 11.5
RPS3P23396 VIM-210ENST00000637053 508 ntTSL 22.47□□□□□ -2.012e-6■■□□□ 11.5
RPS3P23396 NDRG1-228ENST00000523931 554 ntTSL 39.51□□□□□ -0.894e-13■■□□□ 11.5
RPS3P23396 CFB-277ENST00000467360 1082 ntTSL 59.41□□□□□ -0.93e-13■■□□□ 11.5
RPS3P23396 PDIA6-206ENST00000489662 564 ntTSL 412.26□□□□□ -0.453e-30■■□□□ 11.5
RPS3P23396 PTBP1-215ENST00000589883 683 ntTSL 318.93■□□□□ 0.623e-17■■□□□ 11.5
RPS3P23396 PLPP3-205ENST00000476206 597 ntTSL 215.07■□□□□ 04e-11■■□□□ 11.5
RPS3P23396 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.31■□□□□ 0.22e-21■■□□□ 11.5
RPS3P23396 GALNT2-203ENST00000488903 593 ntTSL 224.99■■□□□ 1.592e-19■■□□□ 11.5
RPS3P23396 USP22-211ENST00000584538 554 ntTSL 411.65□□□□□ -0.541e-11■■□□□ 11.5
RPS3P23396 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.84■□□□□ 0.774e-8■■□□□ 11.5
RPS3P23396 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.314e-8■■□□□ 11.5
RPS3P23396 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.434e-8■■□□□ 11.5
RPS3P23396 LEMD2-203ENST00000442696 839 ntTSL 521.71■■□□□ 1.074e-8■■□□□ 11.5
RPS3P23396 PSMD4-206ENST00000453615 371 ntTSL 38.25□□□□□ -1.091e-7■■□□□ 11.5
RPS3P23396 SLC38A5-203ENST00000429543 656 ntTSL 514.09□□□□□ -0.152e-6■■□□□ 11.5
RPS3P23396 SLC38A5-207ENST00000488083 622 ntTSL 313.86□□□□□ -0.192e-6■■□□□ 11.5
RPS3P23396 PSME1-208ENST00000561059 947 ntTSL 212.76□□□□□ -0.374e-9■■□□□ 11.5
RPS3P23396 RPN1-203ENST00000479113 558 ntTSL 43.93□□□□□ -1.783e-10■■□□□ 11.5
RPS3P23396 TFRC-207ENST00000463356 533 ntTSL 36.41□□□□□ -1.385e-7■■□□□ 11.5
RPS3P23396 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.477e-10■■□□□ 11.5
RPS3P23396 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.782e-8■■□□□ 11.5
RPS3P23396 GRN-202ENST00000585348 600 ntTSL 211.37□□□□□ -0.594e-7■■□□□ 11.5
RPS3P23396 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.93e-9■■□□□ 11.5
RPS3P23396 SARAF-202ENST00000517569 487 ntTSL 1 (best)18.88■□□□□ 0.613e-9■■□□□ 11.5
RPS3P23396 TTC14-204ENST00000462895 836 ntTSL 517.48■□□□□ 0.393e-9■■□□□ 11.5
RPS3P23396 CDKN1A-205ENST00000459970 604 ntTSL 517.41■□□□□ 0.383e-9■■□□□ 11.5
RPS3P23396 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-9■■□□□ 11.5
RPS3P23396 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.293e-9■■□□□ 11.5
RPS3P23396 CDKN1A-207ENST00000478800 616 ntTSL 216.49■□□□□ 0.233e-9■■□□□ 11.5
RPS3P23396 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-9■■□□□ 11.5
RPS3P23396 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.4■□□□□ 0.223e-9■■□□□ 11.5
RPS3P23396 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.163e-9■■□□□ 11.5
RPS3P23396 SLC2A6-205ENST00000485978 3417 ntTSL 515.53■□□□□ 0.083e-9■■□□□ 11.5
RPS3P23396 TTC14-209ENST00000491380 601 ntTSL 315.39■□□□□ 0.053e-9■■□□□ 11.5
RPS3P23396 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.073e-9■■□□□ 11.5
RPS3P23396 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.183e-9■■□□□ 11.5
RPS3P23396 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.98□□□□□ -0.333e-9■■□□□ 11.5
Retrieved 100 of 24,271 protein–RNA pairs in 457.7 ms