Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
EPHA1P21709 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.72□□□□□ -0.21
EPHA1P21709 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
EPHA1P21709 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EPHA1P21709 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.72□□□□□ -0.21
EPHA1P21709 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EPHA1P21709 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
EPHA1P21709 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.71□□□□□ -0.21
EPHA1P21709 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 TUBB3P1-201ENST00000405796 1332 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 AC012569.1-201ENST00000591191 1524 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 AC010491.1-201ENST00000563101 2797 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.71□□□□□ -0.21
EPHA1P21709 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.71□□□□□ -0.21
EPHA1P21709 MIR943-201ENST00000401286 94 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 RBPMS2P1-201ENST00000437762 623 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 KLF2P3-201ENST00000451977 1087 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.71□□□□□ -0.21
EPHA1P21709 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.71□□□□□ -0.21
EPHA1P21709 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 AL512356.2-201ENST00000546955 174 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 AC190387.1-201ENST00000551683 408 ntBASIC13.71□□□□□ -0.21
EPHA1P21709 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.71□□□□□ -0.21
EPHA1P21709 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.71□□□□□ -0.21
EPHA1P21709 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.71□□□□□ -0.21
EPHA1P21709 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EPHA1P21709 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.71□□□□□ -0.21
EPHA1P21709 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.71□□□□□ -0.21
EPHA1P21709 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.71□□□□□ -0.21
EPHA1P21709 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EPHA1P21709 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EPHA1P21709 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
EPHA1P21709 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EPHA1P21709 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.71□□□□□ -0.22
EPHA1P21709 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.71□□□□□ -0.22
EPHA1P21709 AC126177.1-201ENST00000547829 2218 ntBASIC13.71□□□□□ -0.22
EPHA1P21709 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EPHA1P21709 LINC02228-204ENST00000642115 2962 ntBASIC13.71□□□□□ -0.22
EPHA1P21709 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.71□□□□□ -0.22
EPHA1P21709 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
EPHA1P21709 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EPHA1P21709 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EPHA1P21709 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.7□□□□□ -0.22
EPHA1P21709 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.7□□□□□ -0.22
EPHA1P21709 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.7□□□□□ -0.22
EPHA1P21709 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 UXT-AS1-201ENST00000590504 1525 ntBASIC13.7□□□□□ -0.22
EPHA1P21709 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
EPHA1P21709 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 AL353732.1-201ENST00000569618 1459 ntBASIC13.7□□□□□ -0.22
EPHA1P21709 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.7□□□□□ -0.22
EPHA1P21709 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EPHA1P21709 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.7□□□□□ -0.22
EPHA1P21709 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.7□□□□□ -0.22
EPHA1P21709 HMGA1P7-201ENST00000406908 502 ntBASIC13.7□□□□□ -0.22
EPHA1P21709 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms