Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.41■□□□□ 0.22
BRAFP15056 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRAFP15056 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.4■□□□□ 0.22
BRAFP15056 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 SNX18-202ENST00000343017 3140 ntBASIC16.4■□□□□ 0.22
BRAFP15056 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 AL161772.1-201ENST00000610494 4412 ntBASIC16.4■□□□□ 0.22
BRAFP15056 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 DNAJB3-202ENST00000449667 1266 ntBASIC16.4■□□□□ 0.22
BRAFP15056 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
BRAFP15056 AC112191.1-201ENST00000523689 701 ntBASIC16.4■□□□□ 0.22
BRAFP15056 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.4■□□□□ 0.22
BRAFP15056 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.4■□□□□ 0.22
BRAFP15056 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 AP001160.2-201ENST00000596071 487 ntBASIC16.4■□□□□ 0.22
BRAFP15056 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.4■□□□□ 0.22
BRAFP15056 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
BRAFP15056 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.4■□□□□ 0.22
BRAFP15056 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.4■□□□□ 0.22
BRAFP15056 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.4■□□□□ 0.22
BRAFP15056 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.4■□□□□ 0.22
BRAFP15056 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRAFP15056 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
BRAFP15056 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
BRAFP15056 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
BRAFP15056 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.39■□□□□ 0.21
BRAFP15056 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 ADH5P3-201ENST00000433842 1137 ntBASIC16.39■□□□□ 0.21
BRAFP15056 ACTG1P14-201ENST00000446382 1122 ntBASIC16.39■□□□□ 0.21
BRAFP15056 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
BRAFP15056 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.39■□□□□ 0.21
BRAFP15056 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.39■□□□□ 0.21
BRAFP15056 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
BRAFP15056 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
BRAFP15056 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRAFP15056 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
BRAFP15056 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 U82695.1-201ENST00000635752 1889 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms