Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TPRP12270 AC010503.4-201ENST00000615487 688 ntBASIC14.8□□□□□ -0.04
TPRP12270 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TPRP12270 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TPRP12270 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 DRD5P1-201ENST00000456605 1438 ntBASIC14.79□□□□□ -0.04
TPRP12270 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
TPRP12270 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 AL138709.1-201ENST00000614840 1693 ntBASIC14.79□□□□□ -0.04
TPRP12270 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.79□□□□□ -0.04
TPRP12270 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TPRP12270 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.79□□□□□ -0.04
TPRP12270 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.79□□□□□ -0.04
TPRP12270 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.79□□□□□ -0.04
TPRP12270 AL353622.2-201ENST00000605846 425 ntBASIC14.79□□□□□ -0.04
TPRP12270 AC242376.2-201ENST00000619355 883 ntBASIC14.79□□□□□ -0.04
TPRP12270 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TPRP12270 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 AC007787.1-201ENST00000588095 1583 ntBASIC14.79□□□□□ -0.04
TPRP12270 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TPRP12270 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TPRP12270 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.78□□□□□ -0.04
TPRP12270 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
TPRP12270 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.78□□□□□ -0.04
TPRP12270 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 AC093724.1-201ENST00000448659 1027 ntBASIC14.78□□□□□ -0.04
TPRP12270 AC026410.1-201ENST00000507366 1101 ntBASIC14.78□□□□□ -0.04
TPRP12270 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.78□□□□□ -0.04
TPRP12270 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 AC004686.1-201ENST00000605113 538 ntBASIC14.78□□□□□ -0.04
TPRP12270 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TPRP12270 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
TPRP12270 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 KRT18P55-202ENST00000578578 1546 ntBASIC14.78□□□□□ -0.04
TPRP12270 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TPRP12270 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TPRP12270 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TPRP12270 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TPRP12270 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.77□□□□□ -0.04
TPRP12270 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms