Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CD48P09326 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 AC112693.3-201ENST00000624819 1983 ntBASIC16.45■□□□□ 0.22
CD48P09326 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.44■□□□□ 0.22
CD48P09326 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.44■□□□□ 0.22
CD48P09326 HLA-J-203ENST00000494367 1087 ntBASIC16.44■□□□□ 0.22
CD48P09326 AL512356.2-201ENST00000546955 174 ntBASIC16.44■□□□□ 0.22
CD48P09326 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.44■□□□□ 0.22
CD48P09326 AL109954.1-202ENST00000564051 2148 ntBASIC16.44■□□□□ 0.22
CD48P09326 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.44■□□□□ 0.22
CD48P09326 AL691403.2-201ENST00000618460 490 ntBASIC16.44■□□□□ 0.22
CD48P09326 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.44■□□□□ 0.22
CD48P09326 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.44■□□□□ 0.22
CD48P09326 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CD48P09326 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD48P09326 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CD48P09326 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 C18orf15-201ENST00000623680 2534 ntBASIC16.43■□□□□ 0.22
CD48P09326 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 AC136604.1-201ENST00000418535 575 ntBASIC16.43■□□□□ 0.22
CD48P09326 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.43■□□□□ 0.22
CD48P09326 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.43■□□□□ 0.22
CD48P09326 AC069262.1-201ENST00000539058 672 ntBASIC16.43■□□□□ 0.22
CD48P09326 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.43■□□□□ 0.22
CD48P09326 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CD48P09326 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.43■□□□□ 0.22
CD48P09326 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CD48P09326 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CD48P09326 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 AC006486.2-201ENST00000624246 2199 ntBASIC16.43■□□□□ 0.22
CD48P09326 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD48P09326 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CD48P09326 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD48P09326 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.42■□□□□ 0.22
CD48P09326 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms