Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RHOP08100 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.32■□□□□ 0.2
RHOP08100 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.32■□□□□ 0.2
RHOP08100 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.32■□□□□ 0.2
RHOP08100 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.32■□□□□ 0.2
RHOP08100 AC010328.2-201ENST00000597698 1111 ntBASIC16.32■□□□□ 0.2
RHOP08100 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.32■□□□□ 0.2
RHOP08100 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
RHOP08100 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.32■□□□□ 0.2
RHOP08100 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHOP08100 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RHOP08100 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 AL133338.1-201ENST00000565695 1517 ntBASIC16.31■□□□□ 0.2
RHOP08100 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RHOP08100 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.31■□□□□ 0.2
RHOP08100 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RHOP08100 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.31■□□□□ 0.2
RHOP08100 AC108725.1-201ENST00000495472 409 ntBASIC16.31■□□□□ 0.2
RHOP08100 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.31■□□□□ 0.2
RHOP08100 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.31■□□□□ 0.2
RHOP08100 AC009542.2-202ENST00000619004 1067 ntBASIC16.31■□□□□ 0.2
RHOP08100 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHOP08100 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RHOP08100 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RHOP08100 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOP08100 AD000864.1-201ENST00000624076 2295 ntBASIC16.3■□□□□ 0.2
RHOP08100 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.3■□□□□ 0.2
RHOP08100 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOP08100 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.3■□□□□ 0.2
RHOP08100 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOP08100 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.3■□□□□ 0.2
RHOP08100 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 AL606495.2-201ENST00000605867 535 ntBASIC16.3■□□□□ 0.2
RHOP08100 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOP08100 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOP08100 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RHOP08100 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOP08100 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms