Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 PCGF3-213ENST00000620529 1899 ntBASIC15.02■□□□□ -0
SNX4O95219 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SNX4O95219 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SNX4O95219 AL139400.1-201ENST00000366220 510 ntBASIC15.02■□□□□ -0
SNX4O95219 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNX4O95219 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.02■□□□□ -0
SNX4O95219 SPDYE7P-202ENST00000420373 878 ntBASIC15.02■□□□□ -0
SNX4O95219 AC142381.1-201ENST00000426099 345 ntBASIC15.02■□□□□ -0
SNX4O95219 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.02■□□□□ -0
SNX4O95219 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.02■□□□□ -0
SNX4O95219 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.02■□□□□ -0
SNX4O95219 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.02■□□□□ -0
SNX4O95219 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SNX4O95219 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.02■□□□□ -0
SNX4O95219 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SNX4O95219 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.02■□□□□ -0
SNX4O95219 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SNX4O95219 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.02□□□□□ -0.01
SNX4O95219 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.02□□□□□ -0.01
SNX4O95219 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.02□□□□□ -0.01
SNX4O95219 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNX4O95219 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 GGT3P-204ENST00000453783 1664 ntBASIC15.01□□□□□ -0.01
SNX4O95219 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.01□□□□□ -0.01
SNX4O95219 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 ALG1L8P-201ENST00000533887 760 ntBASIC15.01□□□□□ -0.01
SNX4O95219 AC015911.4-201ENST00000588022 1070 ntBASIC15.01□□□□□ -0.01
SNX4O95219 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX4O95219 SPTSSB-204ENST00000617024 1292 ntBASIC15.01□□□□□ -0.01
SNX4O95219 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 MIR600HG-201ENST00000449175 5984 ntBASIC15.01□□□□□ -0.01
SNX4O95219 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX4O95219 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX4O95219 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX4O95219 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms