Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX2-2O95096 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX2-2O95096 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX2-2O95096 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX2-2O95096 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC104640.1-201ENST00000562617 2109 ntBASIC14.62□□□□□ -0.07
NKX2-2O95096 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 RN7SL618P-201ENST00000477850 296 ntBASIC14.62□□□□□ -0.07
NKX2-2O95096 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX2-2O95096 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX2-2O95096 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX2-2O95096 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX2-2O95096 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 AC087499.5-201ENST00000452760 1342 ntBASIC14.62□□□□□ -0.07
NKX2-2O95096 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-2O95096 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX2-2O95096 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-2O95096 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NKX2-2O95096 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-2O95096 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NKX2-2O95096 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX2-2O95096 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-2O95096 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NKX2-2O95096 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 TREML5P-201ENST00000421694 576 ntBASIC14.61□□□□□ -0.07
NKX2-2O95096 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX2-2O95096 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX2-2O95096 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX2-2O95096 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms