Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 MBLAC2-202ENST00000514906 1936 ntBASIC14.52□□□□□ -0.09
CLPXO76031 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CLPXO76031 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.52□□□□□ -0.09
CLPXO76031 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CLPXO76031 CICP17-201ENST00000418553 2377 ntBASIC14.52□□□□□ -0.09
CLPXO76031 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CLPXO76031 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.52□□□□□ -0.09
CLPXO76031 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CLPXO76031 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLPXO76031 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.51□□□□□ -0.09
CLPXO76031 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
CLPXO76031 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.51□□□□□ -0.09
CLPXO76031 FOSL1P1-201ENST00000511041 816 ntBASIC14.51□□□□□ -0.09
CLPXO76031 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 ST20-AS1-201ENST00000560255 4223 ntBASIC14.51□□□□□ -0.09
CLPXO76031 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.51□□□□□ -0.09
CLPXO76031 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.51□□□□□ -0.09
CLPXO76031 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLPXO76031 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
CLPXO76031 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLPXO76031 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.5□□□□□ -0.09
CLPXO76031 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLPXO76031 IGHV3-47-201ENST00000425060 335 ntBASIC14.5□□□□□ -0.09
CLPXO76031 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLPXO76031 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.5□□□□□ -0.09
CLPXO76031 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.5□□□□□ -0.09
CLPXO76031 BNIP3P18-201ENST00000593976 575 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms