Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MIR4321-201ENST00000592276 80 ntBASIC15.33■□□□□ 0.04
CPNE3O75131 AL132655.2-201ENST00000596276 594 ntBASIC15.33■□□□□ 0.04
CPNE3O75131 AL033527.5-202ENST00000641632 1098 ntBASIC15.33■□□□□ 0.04
CPNE3O75131 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CPNE3O75131 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPNE3O75131 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 GAPDHP21-201ENST00000450301 1010 ntBASIC15.32■□□□□ 0.04
CPNE3O75131 POU5F1P6-201ENST00000466990 990 ntBASIC15.32■□□□□ 0.04
CPNE3O75131 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE3O75131 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 AC104794.3-201ENST00000566840 1248 ntBASIC15.32■□□□□ 0.04
CPNE3O75131 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.32■□□□□ 0.04
CPNE3O75131 MIR6069-201ENST00000620069 79 ntBASIC15.32■□□□□ 0.04
CPNE3O75131 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE3O75131 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE3O75131 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE3O75131 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 AC092171.3-201ENST00000610122 2651 ntBASIC15.31■□□□□ 0.04
CPNE3O75131 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 AC068587.6-202ENST00000641839 5619 ntBASIC15.31■□□□□ 0.04
CPNE3O75131 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE3O75131 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE3O75131 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.31■□□□□ 0.04
CPNE3O75131 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CPNE3O75131 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 AC007541.1-201ENST00000570282 1469 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms