Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MYCLP1-201ENST00000372451 1075 ntBASIC14.16□□□□□ -0.14
PFDN1O60925 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.16□□□□□ -0.14
PFDN1O60925 KRT18P23-201ENST00000435622 1283 ntBASIC14.16□□□□□ -0.14
PFDN1O60925 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PFDN1O60925 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.16□□□□□ -0.14
PFDN1O60925 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 MIR3180-5-201ENST00000583743 153 ntBASIC14.16□□□□□ -0.14
PFDN1O60925 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PFDN1O60925 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
PFDN1O60925 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 PCDHB18P-202ENST00000526308 3197 ntBASIC14.16□□□□□ -0.14
PFDN1O60925 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 AC114271.1-201ENST00000612689 2813 ntBASIC14.16□□□□□ -0.14
PFDN1O60925 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.15□□□□□ -0.14
PFDN1O60925 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.15□□□□□ -0.14
PFDN1O60925 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PFDN1O60925 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.15□□□□□ -0.14
PFDN1O60925 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 AC004241.5-201ENST00000623870 2448 ntBASIC14.15□□□□□ -0.14
PFDN1O60925 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 MIR497HG-202ENST00000572453 3838 ntBASIC14.15□□□□□ -0.14
PFDN1O60925 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PFDN1O60925 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.15□□□□□ -0.14
PFDN1O60925 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.15□□□□□ -0.14
PFDN1O60925 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PFDN1O60925 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.15□□□□□ -0.15
PFDN1O60925 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 AC022497.1-201ENST00000624916 3691 ntBASIC14.14□□□□□ -0.15
PFDN1O60925 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PFDN1O60925 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
PFDN1O60925 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN1O60925 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 DUSP5P2-201ENST00000426873 1033 ntBASIC14.14□□□□□ -0.15
PFDN1O60925 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms