Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 AC127383.1-201ENST00000444697 1800 ntBASIC16.04■□□□□ 0.16
PRAMEF11O60813 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MEIS3P1-201ENST00000495167 958 ntBASIC16.04■□□□□ 0.16
PRAMEF11O60813 DOC2GP-202ENST00000514950 1163 ntBASIC16.04■□□□□ 0.16
PRAMEF11O60813 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MIR4745-201ENST00000577608 62 ntBASIC16.04■□□□□ 0.16
PRAMEF11O60813 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF11O60813 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF11O60813 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 AC002472.2-201ENST00000442739 958 ntBASIC16.03■□□□□ 0.16
PRAMEF11O60813 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 LINC02560-201ENST00000596379 459 ntBASIC16.03■□□□□ 0.16
PRAMEF11O60813 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRAMEF11O60813 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.03■□□□□ 0.16
PRAMEF11O60813 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF11O60813 AC105250.1-201ENST00000509378 2057 ntBASIC16.03■□□□□ 0.16
PRAMEF11O60813 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PRAMEF11O60813 AC092850.2-201ENST00000623821 2697 ntBASIC16.02■□□□□ 0.16
PRAMEF11O60813 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.02■□□□□ 0.16
PRAMEF11O60813 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF11O60813 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF11O60813 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms