Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.82■□□□□ 0.44
ACTN4O43707 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.82■□□□□ 0.44
ACTN4O43707 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ACTN4O43707 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.82■□□□□ 0.44
ACTN4O43707 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.82■□□□□ 0.44
ACTN4O43707 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.81■□□□□ 0.44
ACTN4O43707 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.81■□□□□ 0.44
ACTN4O43707 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ACTN4O43707 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.81■□□□□ 0.44
ACTN4O43707 AC136604.1-201ENST00000418535 575 ntBASIC17.81■□□□□ 0.44
ACTN4O43707 AC005237.2-201ENST00000434368 219 ntBASIC17.81■□□□□ 0.44
ACTN4O43707 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.81■□□□□ 0.44
ACTN4O43707 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.81■□□□□ 0.44
ACTN4O43707 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.81■□□□□ 0.44
ACTN4O43707 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.81■□□□□ 0.44
ACTN4O43707 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.81■□□□□ 0.44
ACTN4O43707 Z99916.3-201ENST00000623422 1080 ntBASIC17.81■□□□□ 0.44
ACTN4O43707 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ACTN4O43707 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ACTN4O43707 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ACTN4O43707 AC091951.1-201ENST00000512854 2465 ntBASIC17.81■□□□□ 0.44
ACTN4O43707 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.81■□□□□ 0.44
ACTN4O43707 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ACTN4O43707 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.81■□□□□ 0.44
ACTN4O43707 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 KRT8P44-201ENST00000441609 1350 ntBASIC17.8■□□□□ 0.44
ACTN4O43707 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 KRT18P32-201ENST00000424695 1287 ntBASIC17.8■□□□□ 0.44
ACTN4O43707 HIST3H2BA-201ENST00000436555 524 ntBASIC17.8■□□□□ 0.44
ACTN4O43707 DNAJB3-201ENST00000446806 729 ntBASIC17.8■□□□□ 0.44
ACTN4O43707 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ACTN4O43707 AC105021.1-202ENST00000570572 669 ntBASIC17.8■□□□□ 0.44
ACTN4O43707 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.8■□□□□ 0.44
ACTN4O43707 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.8■□□□□ 0.44
ACTN4O43707 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.8■□□□□ 0.44
ACTN4O43707 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ACTN4O43707 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.8■□□□□ 0.44
ACTN4O43707 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACTN4O43707 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 AL607033.1-201ENST00000623900 1599 ntBASIC17.79■□□□□ 0.44
ACTN4O43707 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.79■□□□□ 0.44
ACTN4O43707 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ACTN4O43707 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.79■□□□□ 0.44
ACTN4O43707 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ACTN4O43707 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.79■□□□□ 0.44
ACTN4O43707 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.79■□□□□ 0.44
ACTN4O43707 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 SPDYE14P-201ENST00000442619 822 ntBASIC17.79■□□□□ 0.44
ACTN4O43707 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.79■□□□□ 0.44
ACTN4O43707 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.79■□□□□ 0.44
ACTN4O43707 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.79■□□□□ 0.44
ACTN4O43707 AC018529.1-201ENST00000613063 361 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms