Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 AC104640.1-201ENST00000562617 2109 ntBASIC15.86■□□□□ 0.13
LDB2O43679 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB2O43679 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 HYMAI-201ENST00000635591 3347 ntBASIC15.85■□□□□ 0.13
LDB2O43679 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 AC074338.1-201ENST00000416825 156 ntBASIC15.85■□□□□ 0.13
LDB2O43679 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.85■□□□□ 0.13
LDB2O43679 AC067863.1-201ENST00000494933 530 ntBASIC15.85■□□□□ 0.13
LDB2O43679 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.85■□□□□ 0.13
LDB2O43679 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.85■□□□□ 0.13
LDB2O43679 AL512361.1-201ENST00000554200 418 ntBASIC15.85■□□□□ 0.13
LDB2O43679 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.85■□□□□ 0.13
LDB2O43679 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.85■□□□□ 0.13
LDB2O43679 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.85■□□□□ 0.13
LDB2O43679 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.85■□□□□ 0.13
LDB2O43679 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
LDB2O43679 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LDB2O43679 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LDB2O43679 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 AC087481.3-201ENST00000602886 1894 ntBASIC15.84■□□□□ 0.13
LDB2O43679 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LDB2O43679 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LDB2O43679 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.84■□□□□ 0.13
LDB2O43679 FAM86GP-201ENST00000448322 971 ntBASIC15.84■□□□□ 0.13
LDB2O43679 SERBP1P3-201ENST00000459980 809 ntBASIC15.84■□□□□ 0.13
LDB2O43679 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LDB2O43679 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.84■□□□□ 0.13
LDB2O43679 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.84■□□□□ 0.13
LDB2O43679 AC025048.3-201ENST00000590609 569 ntBASIC15.84■□□□□ 0.13
LDB2O43679 AC005702.4-201ENST00000618393 416 ntBASIC15.84■□□□□ 0.13
LDB2O43679 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.84■□□□□ 0.13
LDB2O43679 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms