Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXN1O15353 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 BX284668.4-201ENST00000453917 508 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 FTH1P14-201ENST00000482930 551 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 IMP3P2-201ENST00000489760 475 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN1O15353 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.91■□□□□ 0.62
FOXN1O15353 MIR4492-201ENST00000581627 80 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
FOXN1O15353 AP003419.4-201ENST00000616071 517 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN1O15353 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
FOXN1O15353 AC132872.4-202ENST00000622924 2756 ntBASIC18.91■□□□□ 0.62
FOXN1O15353 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN1O15353 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
FOXN1O15353 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN1O15353 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.9■□□□□ 0.62
FOXN1O15353 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXN1O15353 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXN1O15353 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
FOXN1O15353 AC008267.1-201ENST00000474858 1069 ntBASIC18.9■□□□□ 0.62
FOXN1O15353 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXN1O15353 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXN1O15353 MIR3619-201ENST00000579667 83 ntBASIC18.9■□□□□ 0.62
FOXN1O15353 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXN1O15353 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN1O15353 AC013467.2-201ENST00000605472 835 ntBASIC18.9■□□□□ 0.62
FOXN1O15353 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
FOXN1O15353 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 AC073439.1-201ENST00000624121 1774 ntBASIC18.9■□□□□ 0.62
FOXN1O15353 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FOXN1O15353 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 ME2P1-201ENST00000426028 1970 ntBASIC18.9■□□□□ 0.62
FOXN1O15353 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN1O15353 AC046158.3-201ENST00000624947 2558 ntBASIC18.89■□□□□ 0.62
FOXN1O15353 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN1O15353 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN1O15353 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.89■□□□□ 0.61
FOXN1O15353 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN1O15353 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 AC068587.3-201ENST00000526613 355 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.89■□□□□ 0.61
FOXN1O15353 AC133539.2-201ENST00000604757 467 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.89■□□□□ 0.61
FOXN1O15353 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXN1O15353 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms