Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.2■□□□□ 0.82
CHL1O00533 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.2■□□□□ 0.82
CHL1O00533 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.2■□□□□ 0.82
CHL1O00533 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHL1O00533 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.2■□□□□ 0.82
CHL1O00533 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHL1O00533 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.2■□□□□ 0.82
CHL1O00533 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
CHL1O00533 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHL1O00533 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHL1O00533 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.19■□□□□ 0.82
CHL1O00533 PRAL-201ENST00000624952 3286 ntBASIC20.19■□□□□ 0.82
CHL1O00533 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHL1O00533 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.19■□□□□ 0.82
CHL1O00533 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.19■□□□□ 0.82
CHL1O00533 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.19■□□□□ 0.82
CHL1O00533 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.19■□□□□ 0.82
CHL1O00533 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 KRT17P7-201ENST00000451704 1104 ntBASIC20.19■□□□□ 0.82
CHL1O00533 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.19■□□□□ 0.82
CHL1O00533 ENPP7P5-201ENST00000541031 1031 ntBASIC20.19■□□□□ 0.82
CHL1O00533 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHL1O00533 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 AC025181.2-201ENST00000606994 802 ntBASIC20.19■□□□□ 0.82
CHL1O00533 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.19■□□□□ 0.82
CHL1O00533 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHL1O00533 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.19■□□□□ 0.82
CHL1O00533 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.19■□□□□ 0.82
CHL1O00533 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 AC084364.1-201ENST00000551967 1556 ntBASIC20.18■□□□□ 0.82
CHL1O00533 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 TMEM14DP-201ENST00000422205 345 ntBASIC20.18■□□□□ 0.82
CHL1O00533 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.18■□□□□ 0.82
CHL1O00533 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.18■□□□□ 0.82
CHL1O00533 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 CLUHP6-201ENST00000580789 941 ntBASIC20.18■□□□□ 0.82
CHL1O00533 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 AC010319.3-201ENST00000597028 470 ntBASIC20.18■□□□□ 0.82
CHL1O00533 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.18■□□□□ 0.82
CHL1O00533 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.18■□□□□ 0.82
CHL1O00533 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.18■□□□□ 0.82
CHL1O00533 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHL1O00533 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.17■□□□□ 0.82
CHL1O00533 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.17■□□□□ 0.82
CHL1O00533 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.17■□□□□ 0.82
CHL1O00533 C1QBPP1-201ENST00000400117 770 ntBASIC20.17■□□□□ 0.82
CHL1O00533 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.17■□□□□ 0.82
CHL1O00533 ACTG1P3-201ENST00000431775 1114 ntBASIC20.17■□□□□ 0.82
CHL1O00533 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHL1O00533 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms